SHOGoiN scMontage

scMontage is a system for searching gene expression databases for similar cells to the query gene expression profile. Please enter your profile in the blank space or try sample queries. [Usage] [Example Results] [Downloads & installation] [Calculation Speed]

Database settings
Specify database (databases are constructed by platform):
CMDB SHOGoiN (Single-cell)
Subset Ensembl
Species H. sapiens M. musculus
Select proper combination in cellmontage database!
Specify genes used to search:
Selected by GO term (for Human/Mouse only):
Upload file: format

Query settings
Specify query:
Example query:
Paste Query (enter a set of unigene ids or supported gene ids with values in CM format):
Upload CM file:
Query ID conversion (mandatory!)
Select your query ID:
Query IDs are converted into IDs of the database specified above ().
Parameter settings
Optional parameters:
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